Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_1950Fe3+ ABC transporter, ATP-binding protein. (263 aa)    
Predicted Functional Partners:
BT_1951
Fe3+ ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.987
BT_1952
Fe3+ ABC transporter, periplasmic iron-binding protein.
 
 
 0.985
BT_2099
Fe3+ ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.946
BT_2098
Fe3+ ABC transporter, periplasmic iron-binding protein.
 
 
 0.932
BT_1949
Conserved hypothetical protein.
 
    0.850
BT_1953
Putative TonB-linked outer membrane receptor; Vitamin B receptor-like.
 
    0.849
BT_1954
Putative surface layer protein.
 
    0.805
BT_1955
Putative cell wall biogenesis protein.
 
    0.736
BT_1956
Putative cell surface protein.
 
    0.711
BT_1957
Conserved hypothetical protein.
 
    0.598
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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