STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1969NADP-dependent malate dehydrogenase. (763 aa)    
Predicted Functional Partners:
BT_2510
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
 
 0.974
BT_1747
Pyruvate-flavodoxin oxidoreductase.
  
 0.972
BT_2256
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
 
 0.971
BT_1820
Pyruvate dehydrogenase.
  
 
 0.962
BT_1822
Pyruvate dehydrogenase, cytochrome.
  
 
 0.962
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
 
 0.962
BT_1575
2-hydroxyacid dehydrogenase homolog; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.961
BT_2955
Formate acetyltransferase 2.
  
 
 0.959
BT_2841
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.957
BT_2836
2-oxoglutarate synthase subunit korA.
  
 
 0.952
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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