STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1972Phosphoenolpyruvate synthase/pyruvate phosphate dikinase. (990 aa)    
Predicted Functional Partners:
BT_1969
NADP-dependent malate dehydrogenase.
  
 
 0.669
BT_2841
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
 
 0.645
BT_0775
Ferredoxin-type protein.
 
  
 0.593
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.584
BT_0963
Ferredoxin-type protein napF homolog.
 
  
 0.575
BT_1747
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.565
BT_0553
Glutamate synthase, large subunit.
  
  
 0.521
BT_1973
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.472
BT_0312
2-oxoisovalerate dehydrogenase beta subunit.
 
   
 0.466
BT_3326
Putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
 
  
 0.427
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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