close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1990Histone-like bacterial DNA-binding protein. (161 aa)    
Predicted Functional Partners:
BT_0707
Putative non-specific DNA binding protein.
  
    0.754
BT_0795
DNA-binding protein-like protein.
  
     0.752
BT_4472
Conserved hypothetical protein.
  
     0.716
BT_1991
N-acetylmuramoyl-L-alanine amidase.
  
    0.674
BT_0281
Putative DNA-binding protein; HU homolog.
  
     0.660
BT_2929
Putative non-specific DNA-binding protein.
  
    0.557
BT_4762
Conserved protein found in conjugate transposon; TraA homolog, fragment.
   
  
 0.430
BT_3325
Conserved hypothetical protein.
  
     0.412
BT_0782
Hypothetical protein.
   
    0.406
BT_1778
Beta-glucosidase (gentiobiase).
   
  
 0.406
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.