BT_1990 protein (Bacteroides thetaiotaomicron)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

BT_1990

Histone-like bacterial DNA-binding protein. (161 aa)

Predicted Functional Partners:

BT_0707

0.760

BT_0795

0.752

BT_4472

0.716

BT_1991

0.673

BT_0281

0.660

BT_2929

0.572

BT_1989

0.431

BT_4762

0.429

BT_3325

0.412

rplS

0.409

Your Current Organism:

Bacteroides thetaiotaomicron

NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BT_0281	BT_1990	BT_0281	BT_1990	Putative DNA-binding protein; HU homolog.	Histone-like bacterial DNA-binding protein.	0.660
BT_0281	BT_2929	BT_0281	BT_2929	Putative DNA-binding protein; HU homolog.	Putative non-specific DNA-binding protein.	0.731
BT_0281	BT_3325	BT_0281	BT_3325	Putative DNA-binding protein; HU homolog.	Conserved hypothetical protein.	0.412
BT_0281	BT_4472	BT_0281	BT_4472	Putative DNA-binding protein; HU homolog.	Conserved hypothetical protein.	0.612
BT_0281	rplS	BT_0281	BT_2489	Putative DNA-binding protein; HU homolog.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.409
BT_0707	BT_0795	BT_0707	BT_0795	Putative non-specific DNA binding protein.	DNA-binding protein-like protein.	0.524
BT_0707	BT_1990	BT_0707	BT_1990	Putative non-specific DNA binding protein.	Histone-like bacterial DNA-binding protein.	0.760
BT_0707	rplS	BT_0707	BT_2489	Putative non-specific DNA binding protein.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.409
BT_0795	BT_0707	BT_0795	BT_0707	DNA-binding protein-like protein.	Putative non-specific DNA binding protein.	0.524
BT_0795	BT_1990	BT_0795	BT_1990	DNA-binding protein-like protein.	Histone-like bacterial DNA-binding protein.	0.752
BT_0795	BT_2929	BT_0795	BT_2929	DNA-binding protein-like protein.	Putative non-specific DNA-binding protein.	0.725
BT_0795	BT_3325	BT_0795	BT_3325	DNA-binding protein-like protein.	Conserved hypothetical protein.	0.403
BT_0795	BT_4472	BT_0795	BT_4472	DNA-binding protein-like protein.	Conserved hypothetical protein.	0.590
BT_0795	rplS	BT_0795	BT_2489	DNA-binding protein-like protein.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.409
BT_1989	BT_1990	BT_1989	BT_1990	Conserved hypothetical protein.	Histone-like bacterial DNA-binding protein.	0.431
BT_1990	BT_0281	BT_1990	BT_0281	Histone-like bacterial DNA-binding protein.	Putative DNA-binding protein; HU homolog.	0.660
BT_1990	BT_0707	BT_1990	BT_0707	Histone-like bacterial DNA-binding protein.	Putative non-specific DNA binding protein.	0.760
BT_1990	BT_0795	BT_1990	BT_0795	Histone-like bacterial DNA-binding protein.	DNA-binding protein-like protein.	0.752
BT_1990	BT_1989	BT_1990	BT_1989	Histone-like bacterial DNA-binding protein.	Conserved hypothetical protein.	0.431
BT_1990	BT_1991	BT_1990	BT_1991	Histone-like bacterial DNA-binding protein.	N-acetylmuramoyl-L-alanine amidase.	0.673

page 1 of 3

Server load: low (10%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About