Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_2073Putative helicase. (652 aa)    
Predicted Functional Partners:
BT_2071
Isocitrate dehydrogenase (NADP).
       0.664
BT_1460
Putative TonB dependent outer membrane protein.
  
    0.639
BT_2070
Citrate synthase; Belongs to the citrate synthase family.
       0.631
BT_0691
Conserved hypothetical protein.
  
    0.619
BT_2072
Aconitate hydratase.
       0.596
BT_0692
Putative calcineurin superfamily phosphohydrolase.
  
    0.591
BT_0964
Putative outer membrane protein, probably involved in nutrient binding; SusC homolog.
  
     0.587
BT_1931
Putative type IIS restriction/modification enzyme.
  
    0.574
BT_4627
DNA modification methylase.
  
    0.574
BT_1821
Transposase.
  
    0.552
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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