Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2086Choloylglycine hydrolase. (352 aa)    
Predicted Functional Partners:
BT_1494
Conserved hypothetical protein.
   
    0.607
BT_1911
7-alpha-hydroxysteroid dehydrogenase.
   
 
 0.578
BT_3146
TenA family transcriptional activator-like protein.
  
  
 0.541
BT_2087
Conserved hypothetical protein.
  
    0.488
BT_0566
alanyl-tRNA synthetase.
     
 0.441
BT_1511
Outer membrane protein OmpA.
   
  
 0.432
BT_3145
Hypothetical protein.
   
  
 0.428
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
      
 0.428
BT_3889
Subtilisin-like serine protease; Belongs to the peptidase S8 family.
      
 0.408
BT_2841
Pyruvate kinase; Belongs to the pyruvate kinase family.
      
 0.405
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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