Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BT_2117Outer membrane protein, putative. (455 aa)    
Predicted Functional Partners:
BT_2119
Transmembrane protein precursor, possibly involved in transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.995
BT_1693
Periplasmic linker protein, putative multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.949
BT_1468
Putative outer membrane efflux protein.
  
 
  0.945
BT_1269
Component of multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.943
BT_1695
Outer membrane efflux protein.
  
 
 
0.930
BT_2118
Transporter, AcrB/D/F family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.926
BT_1213
Periplasmic component of efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.923
BT_2251
Putative membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.923
BT_2688
Outer membrane efflux protein.
  
  
 
0.923
BT_3905
Putative alkaline protease aprF.
  
 
 
0.923
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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