STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_2140Sodium-dependent transporter-like. (297 aa)    
Predicted Functional Partners:
BT_2142
Conserved hypothetical protein, with a conserved domain.
  
    0.710
BT_4239
Conserved hypothetical protein.
  
    0.697
BT_2141
Putative N-acetylmuramoyl-L-alanine amidase amiA.
  
    0.688
BT_4557
Hypothetical protein; WD4-like Beta Propeller.
  
     0.630
BT_0328
Conserved hypothetical protein.
  
    0.620
BT_4419
Conserved hypothetical protein.
  
     0.618
BT_0631a
Conserved hypothetical protein; BT-GM0641.
  
     0.617
BT_2228
Conserved hypothetical protein.
  
     0.614
BT_0576
Conserved hypothetical protein.
  
    0.613
BT_1911
7-alpha-hydroxysteroid dehydrogenase.
   
  
 0.613
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.