STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_2147O-acetyl transferase. (337 aa)    
Predicted Functional Partners:
BT_1175
Conserved hypothetical protein.
 
  
 0.737
BT_4652
Oligo alginate lyase-like.
  
    0.737
BT_1894
TPR-repeat-containing protein.
  
     0.721
BT_2961
Putative lipase.
 
    0.694
BT_4655
Conserved hypothetical protein.
  
    0.692
BT_3198
Conserved hypothetical protein.
  
     0.686
BT_4327
Conserved hypothetical protein.
  
     0.685
BT_3536
Conserved hypothetical protein.
  
     0.670
BT_0480
Glycosyltransferase.
  
  
 0.665
BT_1668
Conserved hypothetical protein, TonB-like protein.
  
     0.634
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.