Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2156Sugar phosphate isomerase/epimerase homolog. (304 aa)    
Predicted Functional Partners:
BT_2157
Probable secreted glycosyl hydrolase.
 
    0.892
BT_2158
Similar to putative dehydrogenases and relate proteins.
 
  
 0.876
BT_2159
Putative oxidoreductase.
 
  
 0.865
BT_4448
Putative dehydrogenase.
 
  
 0.777
BT_4447
Conserved hypothetical protein.
 
    0.763
BT_2160
Putative regulatory protein.
  
  
 0.698
BT_3581
Similar to putative dehydrogenases and relate proteins.
 
  
 0.639
BT_3469
Probable secreted glycosyl hydrolase.
 
    0.632
BT_3470
Putative dehydrogenase.
 
  
 0.601
BT_4330
Xanthosine permease.
 
  
 0.519
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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