Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2157Probable secreted glycosyl hydrolase. (290 aa)    
Predicted Functional Partners:
BT_2158
Similar to putative dehydrogenases and relate proteins.
 
    0.924
BT_4447
Conserved hypothetical protein.
  
  
0.908
BT_2156
Sugar phosphate isomerase/epimerase homolog.
 
    0.892
BT_4448
Putative dehydrogenase.
 
     0.785
BT_4446
Sugar phosphate isomerase/epimerase.
 
    0.764
BT_3470
Putative dehydrogenase.
 
    0.743
BT_2159
Putative oxidoreductase.
 
    0.719
BT_3581
Similar to putative dehydrogenases and relate proteins.
 
    0.707
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.496
BT_2899
Hypothetical protein; Six-hairpin glycosidase-like.
  
    0.475
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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