Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2194Sialidase precursor, exo-alpha-sialidase. (316 aa)    
Predicted Functional Partners:
BT_2193
Peptidase S26A, signal peptidase.
 
    0.806
BT_2195
SusD homolog.
 
    0.724
BT_2192
Putative lipoprotein.
  
    0.672
BT_2196
SusC homolog.
 
    0.648
BT_2191
Beta-galactosidase.
  
    0.639
BT_2190
Beta-galactosidase.
 
    0.597
BT_3133
Alpha-galactosidase.
  
    0.551
BT_4072
Alpha-mannosidase.
  
  
 0.529
BT_3169
Alpha-xylosidase.
  
    0.517
BT_2432
Beta-mannosidase precursor; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.497
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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