Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BT_0164 | BT_2211 | Putative outer membrane protein, alpha-2-macroglobulin-like protein. | Putative transmembrane protein. | 0.506 |
BT_0164 | BT_2213 | Putative outer membrane protein, alpha-2-macroglobulin-like protein. | Conserved hypothetical protein. | 0.562 |
BT_0164 | BT_2216 | Putative outer membrane protein, alpha-2-macroglobulin-like protein. | Conserved hypothetical protein, putative integral membrane protein. | 0.607 |
BT_0164 | BT_2224 | Putative outer membrane protein, alpha-2-macroglobulin-like protein. | RDD family-like membrane protein. | 0.494 |
BT_1766 | BT_2211 | Putative ribonucleoprotein-related protein. | Putative transmembrane protein. | 0.509 |
BT_1766 | BT_2213 | Putative ribonucleoprotein-related protein. | Conserved hypothetical protein. | 0.534 |
BT_1766 | BT_2216 | Putative ribonucleoprotein-related protein. | Conserved hypothetical protein, putative integral membrane protein. | 0.602 |
BT_1766 | BT_2224 | Putative ribonucleoprotein-related protein. | RDD family-like membrane protein. | 0.412 |
BT_1786 | BT_2213 | Putative lipoprotein. | Conserved hypothetical protein. | 0.533 |
BT_1786 | BT_2214 | Putative lipoprotein. | Conserved hypothetical protein. | 0.475 |
BT_2211 | BT_0164 | Putative transmembrane protein. | Putative outer membrane protein, alpha-2-macroglobulin-like protein. | 0.506 |
BT_2211 | BT_1766 | Putative transmembrane protein. | Putative ribonucleoprotein-related protein. | 0.509 |
BT_2211 | BT_2212 | Putative transmembrane protein. | Magnesium chelatase, subunit I, putative ATPase. | 0.929 |
BT_2211 | BT_2213 | Putative transmembrane protein. | Conserved hypothetical protein. | 0.950 |
BT_2211 | BT_2214 | Putative transmembrane protein. | Conserved hypothetical protein. | 0.940 |
BT_2211 | BT_2215 | Putative transmembrane protein. | Putative transmembrane protein. | 0.726 |
BT_2211 | BT_2216 | Putative transmembrane protein. | Conserved hypothetical protein, putative integral membrane protein. | 0.940 |
BT_2211 | BT_2224 | Putative transmembrane protein. | RDD family-like membrane protein. | 0.870 |
BT_2212 | BT_2211 | Magnesium chelatase, subunit I, putative ATPase. | Putative transmembrane protein. | 0.929 |
BT_2212 | BT_2213 | Magnesium chelatase, subunit I, putative ATPase. | Conserved hypothetical protein. | 0.857 |
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