Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2236Endonuclease-like protein; Belongs to the UPF0102 family. (121 aa)    
Predicted Functional Partners:
BT_2846
Magnesium chelatase, subunit ChlI.
 
  
 0.764
BT_2237
Putative MmcQ-like protein.
  
    0.727
BT_2235
Hypothetical protein.
  
    0.713
BT_2238
Putative biotin--(acetyl-CoA carboxylase) synthetase.
       0.713
tadA
Putative cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.690
BT_2239
Carboxyl-terminal protease.
  
    0.586
BT_3070
Smf protein DNA processing chain A.
 
  
 0.556
BT_2800
Putative amidophosphoribosyl-transferase.
 
    0.521
BT_3947
Competence protein.
  
    0.486
BT_2845
Possible thiol-disulfide oxidoreductase; AhpC/TSA family-like protein.
  
    0.421
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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