Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2274Hypothetical protein. (241 aa)    
Predicted Functional Partners:
rsmI
Methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.836
BT_2272
Conserved hypothetical protein.
 
    0.832
BT_1976a
Putative lipoprotein; BT-GM2010.
  
     0.759
BT_4191
Hypothetical protein.
  
     0.757
BT_4719
Conserved hypothetical protein.
  
    0.752
BT_1675
Conserved protein, with a conserved TPR domain.
  
    0.737
BT_4361
Conserved hypothetical protein.
  
    0.736
BT_2276
Putative permease.
 
  
 0.718
BT_4557
Hypothetical protein; WD4-like Beta Propeller.
  
    0.707
BT_2817
TonB-dependent receptor-like protein.
  
    0.699
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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