Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2373Conserved hypothetical protein. (520 aa)    
Predicted Functional Partners:
BT_2374
Conserved hypothetical protein.
 
    0.981
BT_1135
Conserved hypothetical protein.
  
    0.746
BT_4492
Conserved hypothetical protein.
  
    0.744
BT_1119
SusC homolog.
  
    0.713
BT_2793
Putative MFS transporter-like protein.
  
     0.699
BT_1118
SusD homolog.
  
    0.690
BT_1690
TPR domain-containing protein.
  
    0.658
BT_2937
Putative glycosyltransferase.
  
    0.653
BT_2069
GCN5-related N-acetyltransferase.
  
    0.652
BT_3643
Putative transmembrane protein.
  
    0.614
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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