Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2376Conserved hypothetical protein. (178 aa)    
Predicted Functional Partners:
BT_1384
Conserved hypothetical protein; General stress protein 26(GS26)-like.
  
    0.744
BT_2385
Conserved hypothetical protein.
 
     0.537
BT_1890
ATP-dependent DNA helicase replicase.
  
    0.490
BT_1187
Transcriptional regulator.
 
    0.453
BT_1594
Putative ferredoxin.
 
    0.446
BT_1429
General stress protein 26 homolog.
  
     0.436
BT_2375
Hypothetical protein.
  
    0.436
BT_4495
Conserved hypothetical protein; Zinc finger, CCHC-type.
  
    0.436
BT_1258
Putative acetyltransferase.
  
     0.428
BT_4488
formamidopyrimidine-DNA glycosylase.
  
    0.418
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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