STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_2392NHL repeat-containing protein. (440 aa)    
Predicted Functional Partners:
BT_2393
SusC homolog.
  
    0.807
BT_2394
SusD homolog.
  
    0.806
BT_2391
Two-component system sensor histidine kinase/response regulator, hybrid (one component system).
     
 0.733
BT_2395
Hypothetical protein.
  
    0.650
Fkp
Fucose kinase.
  
   
 0.493
BT_3862
Endo-alpha-mannosidase.
  
    0.432
BT_0277
Coagulation factor 5/8 type, C-terminal.
  
    0.412
BT_1275
L-fuculose kinase.
   
  
 0.409
BT_1274
L-fuculose-1-phosphate aldolase.
   
  
 0.406
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.