Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2853Hypothetical protein. (62 aa)    
Predicted Functional Partners:
BT_2854
Periplasmic beta-glucosidase precursor.
  
    0.783
BT_2855
Beta-mannosidase precursor.
       0.773
BT_2852
Putative beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
    0.706
BT_2851
Alpha-galactosidase (melibiase).
  
    0.532
BT_2856
Conserved hypothetical protein.
  
    0.474
BT_2857
Galactose-binding like protein.
  
    0.416
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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