Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2873General stress protein A-like. (309 aa)    
Predicted Functional Partners:
BT_2869
Putative succinyltransferase involved in succinoglycan biosynthesis.
 
    0.914
BT_2865
Glycoside transferase family 4.
 
  
 0.913
BT_2872
Putative capsular polysaccharide synthesis protein.
 
  
 0.904
BT_2870
Glycoside transferase family 14.
 
  
 0.897
BT_2868
Glycoside transferase family 2.
 
  
 0.887
BT_2871
Glycoside transferase family 14.
 
  
 0.880
BT_2866
Glycoside transferase family 4.
 
  
 0.860
BT_2875
Serine O-acetyltransferase.
  
  
 0.795
BT_2874
Putative colanic acid biosynthesis glycosyltransferase.
  
  
 0.793
BT_2867
TonB box, N-terminal.
  
  
 0.782
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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