Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2902Hypothetical protein; Fibronectin, type III-like fold. (402 aa)    
Predicted Functional Partners:
BT_2905
SusC homolog.
 
    0.953
BT_2904
SusD homolog.
 
    0.947
BT_2903
Galactose-binding like protein.
 
   
0.831
BT_2919
SusD homolog.
 
    0.813
BT_2920
SusC homolog.
 
    0.812
BT_2966
Galactose-binding like protein.
 
    0.795
BT_2901
Putative glycoside hydrolase.
  
    0.791
BT_2967
SusD homolog.
  
    0.786
BT_4134
SusD homolog.
  
    0.786
BT_4135
SusC homolog.
  
    0.786
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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