Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_2964Chondroitinase AC precursor. (721 aa)    
Predicted Functional Partners:
BT_2963
Glycosyl hydrolase, family 88.
 
  
 0.838
BT_2962
Hypothetical protein.
  
    0.665
BT_2961
Putative lipase.
       0.648
BT_3021
Conserved hypothetical protein.
 
    0.631
BT_3348
Putative unsaturated glucuronyl hydrolase.
 
  
 0.627
BT_2970
alpha-L-fucosidase precursor.
 
  
 0.596
BT_2937
Putative glycosyltransferase.
  
     0.548
BT_4658
Glucuronyl hydrolase.
 
  
 0.543
BT_3331
SusD homolog.
  
  
 0.529
BT_2965
Conserved hypothetical protein.
  
    0.513
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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