Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BT_3091Putative regulatory protein. (550 aa)    
Predicted Functional Partners:
BT_3090
SusC homolog.
 
  
 0.738
BT_3089
SusD homolog.
 
    0.712
BT_0267
Two-component system sensor histidine kinase/response regulator, hybrid (one component system).
   
  
 0.613
susB
Alpha-glucosidase SusB; Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation.
 
    0.571
BT_3088
Conserved hypothetical protein.
 
    0.559
BT_4581
Alpha-glucosidase.
 
     0.532
BT_3092
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
       0.527
BT_3094
Putative secreted xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.516
BT_1311
RNA polymerase sigma factor rpoD (Sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
  
 0.508
BT_3087
Cycloisomaltooligosaccharide glucanotransferase.
 
     0.501
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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