Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_3129Putative flagellar motor protein MotB. (280 aa)    
Predicted Functional Partners:
BT_1194
Outer membrane protein, OmpA family.
  
0.937
BT_1501
Major outer membrane protein OmpA.
   
 0.922
BT_1505
Outer membrane protein.
   
 0.921
BT_1511
Outer membrane protein OmpA.
   
 0.921
BT_1791
Major outer membrane protein OmpA homolog.
   
 0.921
BT_2485
Major outer membrane protein OmpA.
   
 0.921
BT_4481
Major outer membrane protein OmpA homolog.
   
 0.921
BT_0066
Major outer membrane protein OmpA.
   
 0.917
BT_1391
Bacterial outer membrane protein.
   
 0.917
BT_2442
Major outer membrane protein OmpA.
   
 0.917
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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