STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_3133Alpha-galactosidase. (657 aa)    
Predicted Functional Partners:
BT_3131
Alpha-galactosidase (melibiase).
 
 
  0.978
BT_2851
Alpha-galactosidase (melibiase).
 
 
  0.930
BT_1760
Glycoside hydrolase family 32.
  
 
 0.907
BT_0455
Sialidase (Neuraminidase).
   
 
  0.900
BT_1918
Choline-sulfatase.
   
 
  0.900
BT_3065
Alpha-galactosidase precursor.
   
 
  0.900
BT_3592
Alpha-galactosidase precursor.
   
 
  0.900
BT_3132
Sialic acid-specific 9-O-acetylesterase.
  
    0.782
BT_1626
Beta-galactosidase.
  
 
 0.767
BT_3179
Beta-galactosidase.
  
 
 0.766
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.