STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_3166Conserved hypothetical protein. (190 aa)    
Predicted Functional Partners:
BT_3211
Conserved hypothetical protein.
  
   
 0.753
BT_4204
Conserved hypothetical protein.
  
   
 0.746
BT_3979
Putative methyltransferase.
  
    0.716
BT_3928
Conserved hypothetical protein.
  
    0.710
BT_3167
Conserved hypothetical protein.
  
    0.698
BT_3921
Putative TonB exported protein.
  
    0.685
BT_0591
Hypothetical protein; Homeobox.
  
    0.649
BT_3559
Endonuclease/exonuclease/phosphatase family.
  
    0.633
BT_3341
Conserved hypothetical protein.
  
    0.618
BT_3168
Putative Fe-S oxidoreductase.
  
    0.605
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.