Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
BT_3192TonB. (249 aa)    
Predicted Functional Partners:
BT_3193
Putative coenzyme A transferase.
  
    0.783
BT_0964
Putative outer membrane protein, probably involved in nutrient binding; SusC homolog.
 
 
 0.680
BT_3193a
Hypothetical protein; BT-GM3230.
       0.603
BT_2759
Conserved hypothetical protein.
  
    0.601
BT_1460
Putative TonB dependent outer membrane protein.
  
    0.598
BT_3247
Conserved hypothetical protein; Tetratricopeptide-like helical.
  
    0.598
BT_1119
SusC homolog.
  
 
 0.573
BT_0968
Conserved hypothetical protein.
  
     0.571
BT_4568
TonB-dependent receptor.
 
 
 0.566
BT_4211
Putative phosphoribosylformylglycinamidine cyclo-ligase.
 
  
 0.559
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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