Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
BT_3205Conserved hypothetical protein, putative cell wall associated RhsD protein. (244 aa)    
Predicted Functional Partners:
BT_3201
Hypothetical protein containing YD repeat.
 
     0.834
BT_3206
Hypothetical protein.
  
    0.791
BT_1992
Hypothetical protein; Containing YD repeat.
 
     0.758
BT_3204
Putative cell wall-associated protein precursor.
  
    0.613
BT_3207
Conserved hypothetical protein, putative cell wall associated RhsD protein.
 
   
0.609
BT_3202
Cell well associated RhsD protein precursor.
 
    
0.508
BT_1789
Aminopeptidase C (bleomycin hydrolase); Belongs to the peptidase C1 family.
  
     0.462
BT_3208
Peptidyl-prolyl cis-trans isomerase.
  
    0.449
BT_1823
Conserved hypothetical protein, putative membrane protein.
  
    0.439
BT_1825
Conserved hypothetical protein.
  
    0.417
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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