Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BT_3248Putative metal ABC transporter, ATP-binding protein. (273 aa)    
Predicted Functional Partners:
BT_2206
Zinc ABC transporter, permease.
 
 0.999
BT_3249
Putative zinc ABC transporter, zinc-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
BT_1750
Glycine betaine/L-proline transport system permease.
  
  
 0.920
BT_1751
Glycine betaine transport ATP-binding protein.
  
 
 
0.910
BT_1662
Putative molybdenum transport ATP-binding protein.
  
 
 
0.909
BT_0834
Putative permease.
   
 
 0.908
BT_2417
Putative permease.
   
 
 0.908
BT_3250
Conserved hypothetical protein.
  
    0.771
BT_3252
Putative transmembrane protein.
  
    0.691
BT_3251
Conserved hypothetical protein, putative integral membrane protein.
  
    0.690
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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