Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_3249Putative zinc ABC transporter, zinc-binding protein; Belongs to the bacterial solute-binding protein 9 family. (308 aa)    
Predicted Functional Partners:
BT_3248
Putative metal ABC transporter, ATP-binding protein.
 
 
 0.998
BT_2206
Zinc ABC transporter, permease.
 
 
 0.992
BT_3250
Conserved hypothetical protein.
  
    0.830
BT_3252
Putative transmembrane protein.
  
    0.739
BT_3251
Conserved hypothetical protein, putative integral membrane protein.
  
    0.738
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
  
    0.738
rpsN
Chloroplast-like 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.638
BT_3254
Dipeptidyl peptidase IV.
  
    0.635
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.618
BT_3255
Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.
  
    0.520
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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