Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_3286Phospholipase/Carboxylesterase. (255 aa)    
Predicted Functional Partners:
BT_3287
Polysaccharide biosynthesis protein.
  
    0.682
BT_3288
Putative integral membrane protein.
  
    0.681
BT_3646
Dihydropteroate synthase.
  
    0.625
BT_0569
Putative acylhydrolase; Acetylhydrolase-like.
 
 
    0.616
ruvB
Holliday junction DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.573
BT_3289
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
    0.555
BT_3586
Putative dehydrogenase.
  
  
 0.473
BT_3566
Conserved hypothetical protein.
 
     0.455
BT_4428
Conserved hypothetical protein.
  
     0.407
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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