STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_3376Nucleotide sugar transaminase; Belongs to the DegT/DnrJ/EryC1 family. (369 aa)    
Predicted Functional Partners:
BT_3372
Glycoside transferase family 2.
 
  
 0.943
BT_3374
Putative carbamoyl-phosphate-synthetase.
 
  
 0.890
BT_3373
Spermidine n1-acetyltransferase.
  
 
 0.869
BT_3375
Aspartate aminotransferase.
  
  
 0.809
BT_0480
Glycosyltransferase.
 
  
 0.767
BT_2884
WbqC-like protein family.
 
  
 0.745
BT_3377
Glycoside transferase family 14.
  
  
 0.738
BT_3379
Glycoside transferase family 2.
  
  
 0.650
BT_2016
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.641
BT_1717
Homolog of lipopolysaccharide biosynthesis protein involved in export.
 
  
 0.639
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.