Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_3389Conserved hypothetical protein. (386 aa)    
Predicted Functional Partners:
BT_3387
Putative polysaccharide deacetylase.
 
  
 0.956
BT_3388
Glycoside transferase family 2.
 
   
0.836
BT_3386
ABC transporter, ATP-binding protein.
  
  
 0.701
BT_3390
GtrA-like protein.
  
  
 0.670
BT_1522
Putative aureobasidin A resistance protein.
 
  
 0.661
BT_1523
CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.516
BT_1524
Hypothetical protein.
 
  
 0.515
BT_0873
Putative sulfatase.
 
  
 0.498
BT_2255
Probable membrane protein.
 
  
 0.487
BT_1850
Putative transmembrane acyltransferase protein.
 
  
 0.426
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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