STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacAPutative transmembrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (228 aa)    
Predicted Functional Partners:
BT_4593
Conserved hypothetical protein; YbbR-like.
 
  
 0.828
BT_3648
Putative modulator of DNA gyrase; TldD homolog.
  
    0.813
BT_3649
Putative modulator of DNA gyrase; PmbA homolog.
  
    0.758
BT_3646
Dihydropteroate synthase.
  
    0.698
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
  
 0.656
mutS2
DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
    0.622
argR
Arginine repressor, transcriptional regulator of arginine metabolism; Regulates arginine biosynthesis genes.
   
    0.559
BT_2749
Putative membrane-associated HD superfamily hydrolase.
 
  
 0.554
BT_3950
Phosphoglucomutase/phosphomannomutase.
  
 
 0.506
BT_1548
Phosphoglucomutase phosphomannomutase.
  
 
 0.501
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.