Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BT_0683 | BT_4581 | BT_0683 | BT_4581 | Alpha-glucosidase. | Alpha-glucosidase. | 0.910 |
BT_0683 | BT_4671 | BT_0683 | BT_4671 | Alpha-glucosidase. | SusC homolog. | 0.461 |
BT_0683 | susA | BT_0683 | BT_3704 | Alpha-glucosidase. | Alpha-amylase (neopullulanase) SusA; Neopullulanase that cleaves 1,4-alpha-glucosidic linkages in starch to produce disaccharides or trisaccharides in starch degradation; Belongs to the glycosyl hydrolase 13 family. | 0.618 |
BT_0683 | susB | BT_0683 | BT_3703 | Alpha-glucosidase. | Alpha-glucosidase SusB; Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation. | 0.920 |
BT_0683 | susC | BT_0683 | BT_3702 | Alpha-glucosidase. | SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation; Belongs to the TonB-dependent receptor family. | 0.542 |
BT_0683 | susD | BT_0683 | BT_3701 | Alpha-glucosidase. | SusD; Major starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation. Belongs to the SusD family. | 0.685 |
BT_0683 | susG | BT_0683 | BT_3698 | Alpha-glucosidase. | Alpha-amylase, susG; Alpha-amylase that cleaves starch into oligosaccharides before internalization for degradation, the first step in starch degradation. | 0.696 |
BT_1763 | susD | BT_1763 | BT_3701 | SusC homolog. | SusD; Major starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation. Belongs to the SusD family. | 0.659 |
BT_4581 | BT_0683 | BT_4581 | BT_0683 | Alpha-glucosidase. | Alpha-glucosidase. | 0.910 |
BT_4581 | BT_4671 | BT_4581 | BT_4671 | Alpha-glucosidase. | SusC homolog. | 0.563 |
BT_4581 | susA | BT_4581 | BT_3704 | Alpha-glucosidase. | Alpha-amylase (neopullulanase) SusA; Neopullulanase that cleaves 1,4-alpha-glucosidic linkages in starch to produce disaccharides or trisaccharides in starch degradation; Belongs to the glycosyl hydrolase 13 family. | 0.653 |
BT_4581 | susB | BT_4581 | BT_3703 | Alpha-glucosidase. | Alpha-glucosidase SusB; Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation. | 0.902 |
BT_4581 | susC | BT_4581 | BT_3702 | Alpha-glucosidase. | SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation; Belongs to the TonB-dependent receptor family. | 0.628 |
BT_4581 | susD | BT_4581 | BT_3701 | Alpha-glucosidase. | SusD; Major starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation. Belongs to the SusD family. | 0.742 |
BT_4581 | susG | BT_4581 | BT_3698 | Alpha-glucosidase. | Alpha-amylase, susG; Alpha-amylase that cleaves starch into oligosaccharides before internalization for degradation, the first step in starch degradation. | 0.905 |
BT_4671 | BT_0683 | BT_4671 | BT_0683 | SusC homolog. | Alpha-glucosidase. | 0.461 |
BT_4671 | BT_4581 | BT_4671 | BT_4581 | SusC homolog. | Alpha-glucosidase. | 0.563 |
BT_4671 | susA | BT_4671 | BT_3704 | SusC homolog. | Alpha-amylase (neopullulanase) SusA; Neopullulanase that cleaves 1,4-alpha-glucosidic linkages in starch to produce disaccharides or trisaccharides in starch degradation; Belongs to the glycosyl hydrolase 13 family. | 0.640 |
BT_4671 | susB | BT_4671 | BT_3703 | SusC homolog. | Alpha-glucosidase SusB; Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation. | 0.579 |
BT_4671 | susD | BT_4671 | BT_3701 | SusC homolog. | SusD; Major starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation. Belongs to the SusD family. | 0.805 |
page 1 of 4