STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_4094Glycosidase. (377 aa)    
Predicted Functional Partners:
BT_4095
Beta-xylosidase (1,4-beta-D-xylan xylosidase); Belongs to the glycosyl hydrolase 43 family.
  
    0.781
BT_4093
Alpha-1,2-mannosidase family protein.
  
    0.709
BT_4096
Lipolytic enzyme, G-D-S-L family; Putative lipase/acylhydrolase with GDSL-like motif domain.
 
    0.642
BT_2949
Putative alpha-1,6-mannanase.
 
  
 0.523
BT_4092
Putative alpha-1,2-mannosidase.
  
    0.466
susG
Alpha-amylase, susG; Alpha-amylase that cleaves starch into oligosaccharides before internalization for degradation, the first step in starch degradation.
  
  
 0.451
susA
Alpha-amylase (neopullulanase) SusA; Neopullulanase that cleaves 1,4-alpha-glucosidic linkages in starch to produce disaccharides or trisaccharides in starch degradation; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.445
BT_0489
Putative gluconate aldolase.
   
  
 0.425
susF
Outer membrane protein SusF; Starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation. SusE and SusF do not constitute the major starch-binding proteins in starch degradation pathway. Has lower affinity for starch compared to SusE.
   
  
 0.416
susE
Outer membrane protein SusE; Starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation. SusE and SusF do not constitute the major starch-binding proteins in starch degradation pathway. Has higher affinity for starch compared to SusF.
  
  
 0.416
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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