Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BT_4154Chitin deacetylase. (322 aa)    
Predicted Functional Partners:
BT_4153
Exopolygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family.
  
    0.793
BT_4152
Beta-galactosidase I.
  
  
 0.774
BT_2525
cephalosporin-C deacetylase.
  
  
 0.677
BT_4155
Pectate lyase; Belongs to the glycosyl hydrolase 28 family.
  
    0.601
BT_3797
Possible alpha-galactosidase.
  
    0.461
BT_4151
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
    0.453
BT_4150
Putative rhamnogalacturonan acetylesterase.
  
  
 0.422
BT_3624
Conserved hypothetical protein.
  
    0.417
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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