Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BT_0073 | BT_0074 | Putative ABC transporter, ATP-binding protein. | Hypothetical protein; Peptidase S24 and S26, C-terminal. | 0.966 |
BT_0073 | BT_4288 | Putative ABC transporter, ATP-binding protein. | ABC transporter ATP-binding protein. | 0.602 |
BT_0074 | BT_0073 | Hypothetical protein; Peptidase S24 and S26, C-terminal. | Putative ABC transporter, ATP-binding protein. | 0.966 |
BT_0074 | BT_4288 | Hypothetical protein; Peptidase S24 and S26, C-terminal. | ABC transporter ATP-binding protein. | 0.606 |
BT_0268 | BT_0269 | SusC homolog. | SusD homolog. | 0.932 |
BT_0268 | BT_0275 | SusC homolog. | Conserved hypothetical protein. | 0.854 |
BT_0268 | BT_0276 | SusC homolog. | Concanavalin A-like lectin/glucanase. | 0.835 |
BT_0268 | BT_0661 | SusC homolog. | Conserved hypothetical protein. | 0.662 |
BT_0268 | BT_4288 | SusC homolog. | ABC transporter ATP-binding protein. | 0.581 |
BT_0268 | BT_4289 | SusC homolog. | Chromosomal hemolysin secretion protein D homolog. | 0.539 |
BT_0269 | BT_0268 | SusD homolog. | SusC homolog. | 0.932 |
BT_0269 | BT_0275 | SusD homolog. | Conserved hypothetical protein. | 0.847 |
BT_0269 | BT_0276 | SusD homolog. | Concanavalin A-like lectin/glucanase. | 0.851 |
BT_0269 | BT_0661 | SusD homolog. | Conserved hypothetical protein. | 0.641 |
BT_0269 | BT_4288 | SusD homolog. | ABC transporter ATP-binding protein. | 0.667 |
BT_0269 | BT_4289 | SusD homolog. | Chromosomal hemolysin secretion protein D homolog. | 0.589 |
BT_0275 | BT_0268 | Conserved hypothetical protein. | SusC homolog. | 0.854 |
BT_0275 | BT_0269 | Conserved hypothetical protein. | SusD homolog. | 0.847 |
BT_0275 | BT_0276 | Conserved hypothetical protein. | Concanavalin A-like lectin/glucanase. | 0.922 |
BT_0275 | BT_0661 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.724 |
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