Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_4295Putative chitobiase. (614 aa)    
Predicted Functional Partners:
BT_4298
SusC homolog.
  
  
 0.932
BT_4297
SusD homolog.
  
    0.908
BT_4296
MscS mechanosensitive ion channel.
  
    0.906
BT_4299
Putative cell surface protein.
  
    0.870
BT_4294
Hypothetical protein.
  
    0.695
BT_2825
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.647
BT_0459
Beta-hexosaminidase precursor.
   
 
  0.620
BT_1632
Chitinase.
   
 
  0.620
BT_1627
Beta-hexosaminidase precursor.
   
 
  0.567
BT_0460
Beta-hexosaminidase precursor.
   
 
  0.556
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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