Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BT_0239 | BT_0749 | Thiol:disulfide interchange protein. | Putative two-component system sensor histidine kinase. | 0.769 |
BT_0239 | BT_0809 | Thiol:disulfide interchange protein. | Putative lipoprotein. | 0.763 |
BT_0239 | BT_1614 | Thiol:disulfide interchange protein. | Conserved hypothetical protein. | 0.527 |
BT_0239 | BT_1740 | Thiol:disulfide interchange protein. | Conserved hypothetical protein. | 0.750 |
BT_0239 | BT_3225 | Thiol:disulfide interchange protein. | Conserved hypothetical protein. | 0.771 |
BT_0239 | BT_3252 | Thiol:disulfide interchange protein. | Putative transmembrane protein. | 0.770 |
BT_0239 | BT_3454 | Thiol:disulfide interchange protein. | Conserved hypothetical protein. | 0.675 |
BT_0239 | BT_3949 | Thiol:disulfide interchange protein. | Conserved hypothetical protein. | 0.775 |
BT_0239 | BT_4300 | Thiol:disulfide interchange protein. | Transcription regulator, CRP family. | 0.772 |
BT_0749 | BT_0239 | Putative two-component system sensor histidine kinase. | Thiol:disulfide interchange protein. | 0.769 |
BT_0749 | BT_0809 | Putative two-component system sensor histidine kinase. | Putative lipoprotein. | 0.764 |
BT_0749 | BT_1740 | Putative two-component system sensor histidine kinase. | Conserved hypothetical protein. | 0.604 |
BT_0749 | BT_3225 | Putative two-component system sensor histidine kinase. | Conserved hypothetical protein. | 0.712 |
BT_0749 | BT_3252 | Putative two-component system sensor histidine kinase. | Putative transmembrane protein. | 0.766 |
BT_0749 | BT_3949 | Putative two-component system sensor histidine kinase. | Conserved hypothetical protein. | 0.736 |
BT_0749 | BT_4300 | Putative two-component system sensor histidine kinase. | Transcription regulator, CRP family. | 0.624 |
BT_0809 | BT_0239 | Putative lipoprotein. | Thiol:disulfide interchange protein. | 0.763 |
BT_0809 | BT_0749 | Putative lipoprotein. | Putative two-component system sensor histidine kinase. | 0.764 |
BT_0809 | BT_1614 | Putative lipoprotein. | Conserved hypothetical protein. | 0.411 |
BT_0809 | BT_1740 | Putative lipoprotein. | Conserved hypothetical protein. | 0.669 |
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