Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_4367Putative outer membrane protein. (431 aa)    
Predicted Functional Partners:
BT_0573
Lipoprotein protein, putative.
 
 
 0.969
BT_3725
Putative outer membrane protein.
  
 
 0.968
BT_3949
Conserved hypothetical protein.
  
   0.952
BT_4306
Conserved hypothetical protein.
 
   0.934
BT_3727
Conserved hypothetical protein.
  
   0.883
BT_3612
Putative FKBP-type peptidyl-prolyl cis-trans isomerase fkpA.
   
 
 0.849
BT_4371
Peptidyl-prolyl cis-trans isomerase.
 
   
 0.822
BT_0814
Conserved hypothetical protein, putative outer membrane protein.
  
 
 0.807
coaX
Putative transcription regulator; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
  
    0.802
BT_3341
Conserved hypothetical protein.
  
    0.789
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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