Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BT_4465Conserved hypothetical protein, putative outer membrane protein. (621 aa)    
Predicted Functional Partners:
BT_4461
RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.641
BT_4460
SusC homolog.
 
   
0.581
BT_4462
Conserved hypothetical protein.
 
    0.555
BT_4466
Hypothetical protein.
  
    0.555
BT_4463
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
    0.522
BT_4464
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-related protein.
  
    0.522
BT_0164
Putative outer membrane protein, alpha-2-macroglobulin-like protein.
 
    0.520
BT_0163
Putative outer membrane protein.
 
    0.485
BT_1254
Inner membrane protein.
 
     0.482
BT_0162
Penicillin-binding protein 1C (PBP-1c).
  
    0.463
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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