Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BT_4549Integrase; Belongs to the 'phage' integrase family. (372 aa)    
Predicted Functional Partners:
BT_4550
Putative transposase; TnpA homolog.
 
    0.896
BT_4547
Excisionase.
 
    0.844
BT_1944
Putative transposase; TnpA homolog.
 
    0.778
BT_4524
Conserved hypothetical protein.
 
    0.777
BT_4616
Hypothetical protein.
 
    0.769
BT_0234
Putative transposase; TnpA homolog.
 
    0.732
BT_0231
Excisionase.
 
    0.712
BT_4521
Integrase; Belongs to the 'phage' integrase family.
  
    0.711
BT_2446
Integrase; Belongs to the 'phage' integrase family.
  
    0.699
xerC
Integrase, site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
    0.651
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.