Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BT_1391 | BT_2159 | BT_1391 | BT_2159 | Bacterial outer membrane protein. | Putative oxidoreductase. | 0.446 |
BT_1391 | BT_2999 | BT_1391 | BT_2999 | Bacterial outer membrane protein. | Helicase IV. | 0.690 |
BT_1391 | BT_4449 | BT_1391 | BT_4449 | Bacterial outer membrane protein. | Putative dehydrogenase. | 0.403 |
BT_1391 | BT_4652 | BT_1391 | BT_4652 | Bacterial outer membrane protein. | Oligo alginate lyase-like. | 0.719 |
BT_1391 | BT_4655 | BT_1391 | BT_4655 | Bacterial outer membrane protein. | Conserved hypothetical protein. | 0.703 |
BT_1391 | BT_4657 | BT_1391 | BT_4657 | Bacterial outer membrane protein. | Heparinase III protein. | 0.572 |
BT_1391 | BT_4745 | BT_1391 | BT_4745 | Bacterial outer membrane protein. | Conserved hypothetical protein. | 0.450 |
BT_1391 | hepC | BT_1391 | BT_4662 | Bacterial outer membrane protein. | Heparinase III protein, heparitin sulfate lyase; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.441 |
BT_2159 | BT_1391 | BT_2159 | BT_1391 | Putative oxidoreductase. | Bacterial outer membrane protein. | 0.446 |
BT_2159 | BT_2999 | BT_2159 | BT_2999 | Putative oxidoreductase. | Helicase IV. | 0.580 |
BT_2159 | BT_4652 | BT_2159 | BT_4652 | Putative oxidoreductase. | Oligo alginate lyase-like. | 0.731 |
BT_2159 | BT_4655 | BT_2159 | BT_4655 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.739 |
BT_2159 | BT_4657 | BT_2159 | BT_4657 | Putative oxidoreductase. | Heparinase III protein. | 0.638 |
BT_2159 | BT_4745 | BT_2159 | BT_4745 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.483 |
BT_2159 | hepC | BT_2159 | BT_4662 | Putative oxidoreductase. | Heparinase III protein, heparitin sulfate lyase; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.503 |
BT_2999 | BT_1391 | BT_2999 | BT_1391 | Helicase IV. | Bacterial outer membrane protein. | 0.690 |
BT_2999 | BT_2159 | BT_2999 | BT_2159 | Helicase IV. | Putative oxidoreductase. | 0.580 |
BT_2999 | BT_4449 | BT_2999 | BT_4449 | Helicase IV. | Putative dehydrogenase. | 0.553 |
BT_2999 | BT_4652 | BT_2999 | BT_4652 | Helicase IV. | Oligo alginate lyase-like. | 0.741 |
BT_2999 | BT_4655 | BT_2999 | BT_4655 | Helicase IV. | Conserved hypothetical protein. | 0.742 |
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