STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_4672Hypothetical protein. (74 aa)    
Predicted Functional Partners:
BT_4668
Arabinogalactan endo-1,4-beta-galactosidase.
  
  
 0.867
BT_4671
SusC homolog.
  
    0.854
BT_4670
SusD homolog.
  
    0.843
BT_4669
Conserved hypothetical protein.
  
  
 0.721
BT_4667
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.718
BT_4186
Conserved hypothetical protein.
   
 
 0.580
BT_2949
Putative alpha-1,6-mannanase.
   
 
 0.575
BT_4673
Two-component system sensor histidine kinase.
  
  
 0.566
BT_0365
Concanavalin A-like lectin/glucanase.
   
   0.466
BT_3045
SusD homolog.
   
   0.406
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.