STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_4697Transcriptional regulator. (589 aa)    
Predicted Functional Partners:
BT_2120
Transcriptional regulator.
  
     0.600
BT_2792
AraC/XylS family transcriptional regulator.
  
    0.592
BT_1797
Putative transcriptional regulator.
  
    0.585
BT_4498
Conserved hypothetical protein.
   
    0.582
BT_2939
Putative transcriptional regulator.
  
     0.570
BT_4698
Conserved hypothetical protein.
       0.570
BT_1404
Putative transcriptional regulator.
  
    0.566
BT_1235
AraC-type transcription regulator.
  
    0.557
BT_2973
Transcriptional regulator.
  
    0.549
BT_1894
TPR-repeat-containing protein.
  
    0.541
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.