Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BT_4763Conserved protein found in conjugate transposon; TraC homolog. (164 aa)    
Predicted Functional Partners:
BT_4762
Conserved protein found in conjugate transposon; TraA homolog, fragment.
 
    0.947
BT_4764
Hypothetical protein.
  
    0.850
BT_0085
Conserved protein found in conjugate transposon; TraO homolog.
 
    0.788
BT_0098
Conserved protein found in conjugate transposon; TraA homolog.
 
    0.783
BT_4778
Conserved protein found in conjugate transposon; TraM homolog, fragment.
 
    0.778
BT_2594
Conserved protein found in conjugate transposon; TraO homolog.
 
    0.776
BT_2288
Conserved protein found in conjugate transposon; TraO homolog.
 
    0.771
BT_0109
Putative DNA binding protein.
  
    0.766
BT_2334
Putative DNA binding protein.
  
    0.762
BT_0084
Conserved protein found in conjugate transposon; TraQ homolog.
 
    0.754
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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