Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
YDR235W | YER029C | J6EFU4 | J5RT94 | PRP42-like protein. | SMB1-like protein. | 0.869 |
YDR235W | YFL017W-A | J6EFU4 | J6EQD2 | PRP42-like protein. | SMX2-like protein. | 0.819 |
YDR235W | YGR074W | J6EFU4 | J4TS44 | PRP42-like protein. | SMD1-like protein. | 0.798 |
YDR235W | YIL061C | J6EFU4 | J6EGH4 | PRP42-like protein. | SNP1-like protein. | 0.939 |
YDR235W | YIR009W | J6EFU4 | J5P9M7 | PRP42-like protein. | MSL1-like protein. | 0.743 |
YDR235W | YLR147C | J6EFU4 | J4TYQ0 | PRP42-like protein. | Small nuclear ribonucleoprotein Sm D3. | 0.846 |
YDR235W | YLR298C | J6EFU4 | J4TYB2 | PRP42-like protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.989 |
YDR235W | YOR159C | J6EFU4 | J6EGT2 | PRP42-like protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.700 |
YDR235W | YPL213W | J6EFU4 | J6EC80 | PRP42-like protein. | LEA1-like protein. | 0.979 |
YDR235W | YPR182W | J6EFU4 | J6EF31 | PRP42-like protein. | SMX3-like protein. | 0.850 |
YER029C | YDR235W | J5RT94 | J6EFU4 | SMB1-like protein. | PRP42-like protein. | 0.869 |
YER029C | YFL017W-A | J5RT94 | J6EQD2 | SMB1-like protein. | SMX2-like protein. | 0.999 |
YER029C | YGR074W | J5RT94 | J4TS44 | SMB1-like protein. | SMD1-like protein. | 0.999 |
YER029C | YIL061C | J5RT94 | J6EGH4 | SMB1-like protein. | SNP1-like protein. | 0.987 |
YER029C | YIR009W | J5RT94 | J5P9M7 | SMB1-like protein. | MSL1-like protein. | 0.995 |
YER029C | YLR147C | J5RT94 | J4TYQ0 | SMB1-like protein. | Small nuclear ribonucleoprotein Sm D3. | 0.999 |
YER029C | YLR298C | J5RT94 | J4TYB2 | SMB1-like protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.992 |
YER029C | YOR159C | J5RT94 | J6EGT2 | SMB1-like protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
YER029C | YPL213W | J5RT94 | J6EC80 | SMB1-like protein. | LEA1-like protein. | 0.995 |
YER029C | YPR182W | J5RT94 | J6EF31 | SMB1-like protein. | SMX3-like protein. | 0.999 |
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