STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YCR028C-ARIM1-like protein. (72 aa)    
Predicted Functional Partners:
YKL003C
MRP17-like protein.
  
  
 0.940
YHL015W
RPS20-like protein.
   
 
 0.845
YNR036C
MRPS12-like protein; Belongs to the universal ribosomal protein uS12 family.
  
  
 0.841
YDR041W
RSM10-like protein.
   
 
 0.825
YMR260C
TIF11-like protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.820
YGR220C
MRPL9-like protein; Belongs to the universal ribosomal protein uL3 family.
   
    0.816
YJR123W
RPS5-like protein; Belongs to the universal ribosomal protein uS7 family.
  
   0.776
YJR113C
RSM7-like protein; Belongs to the universal ribosomal protein uS7 family.
  
   0.776
YKL009W
MRT4-like protein.
   
    0.775
YLR340W
60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...]
   
    0.775
Your Current Organism:
Saccharomyces kudriavzevii
NCBI taxonomy Id: 226230
Other names: S. kudriavzevii IFO 1802, Saccharomyces kudriavzevii IFO 1802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.