STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLR097CHRT3-like protein. (347 aa)    
Predicted Functional Partners:
YDR328C
SKP1-like protein; Belongs to the SKP1 family.
    
 0.978
YJL047C
RTT101-like protein; Belongs to the cullin family.
    
 0.777
YGR003W
CUL3-like protein; Belongs to the cullin family.
    
 0.777
YDL132W
CDC53-like protein; Belongs to the cullin family.
    
 0.777
YOL133W
HRT1-like protein.
    
  0.602
YJR052W
RAD7-like protein.
    
 0.499
YEL037C
RAD23-like protein.
    
 0.446
YOL111C
MDY2-like protein.
    
 0.437
YLR167W
RPS31-like protein.
    
  0.436
YER114C
BOI2-like protein.
    
  0.436
Your Current Organism:
Saccharomyces kudriavzevii
NCBI taxonomy Id: 226230
Other names: S. kudriavzevii IFO 1802, Saccharomyces kudriavzevii IFO 1802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.